PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM71987.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 237aa    MW: 25845.4 Da    PI: 4.6684
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM71987.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.81.2e-1764114155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 + y+GVr++  +++Wv+e+r+p +   + r++lg++ tae+Aa+a++ a+++l+g
  OWM71987.1  64 PVYRGVRRRN-NNKWVCELREPAK---QSRIWLGTYPTAEMAARAHDVAALALRG 114
                 68*****887.8*********833...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MDFFGHYFDP KPYESEYNPS MPESSTFPDS CTSRRSHSDE EHLLASSRPK KRAGRVVFKE  60
TRHPVYRGVR RRNNNKWVCE LREPAKQSRI WLGTYPTAEM AARAHDVAAL ALRGSSACLN  120
FADSAWRLPV PASTDPADIR RTAAEAANAF RPDKLEDAPG DGADAGNEEE EAAGGQGSEG  180
VVDAIPSSFG AGDGTWDMEG WLEGPLLSPP HGPGSGVQVG WEEPEPDAEV SLWSFSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.15e-51ERF family protein