PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM72062.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 576aa MW: 66249 Da PI: 5.5001

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM72062.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.9	2.3e-08	466	514	2	47
SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 +rWT eE+ +++d v++ + W+ r+++ ++t+++++s+++++ OWM72062.1 466 LRWTSEEETRFKDIVRLNSPSqgkcFWDDLFRYFP-KKTREDLVSYYFNV 514 79**************9779999******.9********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MAKWSVLKHG SVLDSSDNGG FSDPENRPLI KDRVDDSRIE YIDKLRSLFY KVLVAFLKDV 60 ADRACVHPVL AKTGDGQLVD LFELYCTVRR RGGYGAVSES GEWGLVTREL GFDGSYISLL 120 KLMHFKYLSE FDTWLRDRCR DVLVENENLE RGLNDFGSLS LELEMGFKVL VFDGVEEANI 180 QYRALYADNE SKASHWVATG HNITESLATV GMGSPDMVSR KRKQESLERM LAWVVDVAKH 240 SDDPRVSLVP EQSKLRMQAL LARDSLFQRR IRQTNLRIQN TPLQKKLKLQ PSNCSDRKES 300 SRCSQSLPIL AKSCLSLPCY SLPIFQARSI GPKKQLENCL KTQAAHRLTE PKDDCTNTYW 360 TSIFCCDEPD PTPKPTGPLF QAKVPEWTGI IFESDPKWLG TELWPPQRDA ESLGRGRVNS 420 CSCLLPGSVE CIRFHIAEER MSLKLQLGYS LFYDWRFNCM GEEVSLRWTS EEETRFKDIV 480 RLNSPSQGKC FWDDLFRYFP KKTREDLVSY YFNVFLLRRR RYQNRVTPEE IDSDDDAADF 540 GSFGDYSERE RVQIPDFPSC SLNQQCTDWE ADEDVD

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MAKWSVLKHG SVLDSSDNGG FSDPENRPLI KDRVDDSRIE YIDKLRSLFY KVLVAFLKDV  60
ADRACVHPVL AKTGDGQLVD LFELYCTVRR RGGYGAVSES GEWGLVTREL GFDGSYISLL  120
KLMHFKYLSE FDTWLRDRCR DVLVENENLE RGLNDFGSLS LELEMGFKVL VFDGVEEANI  180
QYRALYADNE SKASHWVATG HNITESLATV GMGSPDMVSR KRKQESLERM LAWVVDVAKH  240
SDDPRVSLVP EQSKLRMQAL LARDSLFQRR IRQTNLRIQN TPLQKKLKLQ PSNCSDRKES  300
SRCSQSLPIL AKSCLSLPCY SLPIFQARSI GPKKQLENCL KTQAAHRLTE PKDDCTNTYW  360
TSIFCCDEPD PTPKPTGPLF QAKVPEWTGI IFESDPKWLG TELWPPQRDA ESLGRGRVNS  420
CSCLLPGSVE CIRFHIAEER MSLKLQLGYS LFYDWRFNCM GEEVSLRWTS EEETRFKDIV  480
RLNSPSQGKC FWDDLFRYFP KKTREDLVSY YFNVFLLRRR RYQNRVTPEE IDSDDDAADF  540
GSFGDYSERE RVQIPDFPSC SLNQQCTDWE ADEDVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	219	224	SRKRKQ