PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM72165.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 293aa    MW: 32467.5 Da    PI: 8.2829
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM72165.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-18109159256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr+++ +g+WvAeIr p +   r r++lg++++ae Aa a+++a+ kl+ge
  OWM72165.1 109 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDSAEAAAYAYDRAAYKLRGE 159
                 59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
METAQQYPIP FSYHDAIDIQ SSLSQLILNS GASPLDSIFS FCDPAPQIMA SPSPESLGSS  60
VYLRQREILD KFSEETRLRN PRDGTKITAA AAQIHSDDGG RGSSLKKKLY RGVRQRHWGK  120
WVAEIRLPQN RMRVWLGTYD SAEAAAYAYD RAAYKLRGEY ARLNFPNLKD PSKLGFGDSS  180
RLNSLKAAVD AKIQAICQKV RRDKAKKGSK KNEKKTDSPP STSSSPSSCP LQSESNQAVL  240
EEDEMWKCAS SLPSAASSVD SAIGFPEESE FEVYSLSKMP SFDPDLIWEI LAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.16e-55ERF family protein