PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM72184.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 272aa MW: 30449.5 Da PI: 9.8962

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM72184.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.9	1.7e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+t Ed l+++++q+G g+W++ +++ g+ R++k+c++rw +yl OWM72184.1 14 KGPWSTKEDAVLINYIQQHGEGHWRSLPKKAGLLRCGKSCRLRWMNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	54	3.7e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++E++l+++ + +lG++ W++Iar+++ gRt++++k++w+++l OWM72184.1 67 RGNITPDEEDLIIRMHSLLGNR-WSLIARMLP-GRTDNEIKNYWNSHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MGRAPCCSKV GLHKGPWSTK EDAVLINYIQ QHGEGHWRSL PKKAGLLRCG KSCRLRWMNY 60 LRPDIKRGNI TPDEEDLIIR MHSLLGNRWS LIARMLPGRT DNEIKNYWNS HLSKRVNNKS 120 TGTKPKPSGN NKPARGPKKR NNSIGATSEV AKSRKKQKVK VGMIKVHQPK AVRVSPYSIT 180 RNNSSDGGPS GLSSSILGAK GGLSETMNYG AVQSVLDDDD QIYHEDYYCD IIEEGDRSHS 240 SCNLEKIFEE YQQLLKGDDN VQLDSFADSL LI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49330.1	9e-65	MYB family protein