PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM72245.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 339aa    MW: 37198.9 Da    PI: 9.0178
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM72245.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3100.41.1e-3123127199
                 EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..E CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelv 93 
                 f+kv tpsdv+k++rlv+pk++ae++    ++ +e++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD++ F++  g+  + +l+
  OWM72245.1  23 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIISFQRGvGEaGKDRLF 121
                 89***************************966778999*************************************************665888999999 PP

                 EEEE-S CS
          B3  94 vkvfrk 99 
                 + ++r+
  OWM72245.1 122 IDWRRR 127
                 999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MLEAGGSTGT YSSVAAIEKE HMFDKVVTPS DVGKLNRLVI PKQHAEKYFP LDSSTNEKGL  60
LLNFEDRNGK PWRFRYSYWN SSQSYVMTKG WSRFVKEKKL DAGDIISFQR GVGEAGKDRL  120
FIDWRRRPDH HHHSVIPPHH GHFSFNGSVP WGSTVPPPHP FLLRHGRDHP RNGYLGGPGV  180
NYGYGNVVNV SPCSVGSLFY LSRSSTVPPL PQQLGISGVH GSSDGAEPPI PVVFDSVPIV  240
QGKAAAKRLR LFGVNMDCPI PESSDHHQEC EILPSTSISH AVTIGSQPPP HQVQLISSSS  300
PPSQSQNPHP QLRLYNGMPL TGKDKAASSS SSMSFDLDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.18e-66B3 family protein