PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM72328.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ARR-B
Protein Properties Length: 529aa    MW: 59158.6 Da    PI: 6.2347
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM72328.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding254.4e-08206275148
                      TSSS-HHHHHHHHHHHHHTTTT..................-HHHHHHHHT....TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..................tWktIartmg....kgRtlkqcksrwqkyl 48 
                      r  WT e+++++v+a+++   +                   +k I  +m     +g+t+ ++ s++qk++
       OWM72328.1 206 RVHWTSELQQKFVEAIERIDRRknpdarfrpvdglgevqvVPKDILDEMRkmgvTGLTRQNVSSHLQKHR 275
                      668*****************99***********************99999999***************97 PP
2G2-like315.7e-102372761855
     G2-like  18 veqLGGsekAtPktile...lmkvkgLtlehvkSHLQkYRl 55 
                 v+ L G+ + +Pk il+    m+v gLt+++v SHLQk+R+
  OWM72328.1 237 VDGL-GEVQVVPKDILDemrKMGVTGLTRQNVSSHLQKHRT 276
                 6678.88889*****75222679*****************7 PP
3Response_reg72.61.6e-24151241108
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl+vd + + +ell++ l++e   +v++++  +eal ll e++  +D+il+   mp+mdGl+ll +ir  +++lp+++++  ++++ +++ ++ Ga 
    OWM72328.1  15 VLLVDNNLKYLELLQNKLQHECKHKVTTCTGVKEALSLLLENKdgFDIILTEFHMPDMDGLQLLDSIRDIGDHLPVVLFSEDQDMAVVKQGFEKGAC 111
                   89*****************66666***************777779**************************************************** PP

                   EEEESS--HHHHH CS
  Response_reg  96 dflsKpfdpeelv 108
                   dfl+Kp+  e+l 
    OWM72328.1 112 DFLVKPIRDEDLK 124
                   ********99985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    
MADRLPGQFA LGLRVLLVDN NLKYLELLQN KLQHECKHKV TTCTGVKEAL SLLLENKDGF  60
DIILTEFHMP DMDGLQLLDS IRDIGDHLPV VLFSEDQDMA VVKQGFEKGA CDFLVKPIRD  120
EDLKMIWKYV LLFRLKKEGI VNNVITEVNN QQAERSESVH QSSSDDTVTH RREGSPAKRR  180
NWDSVDQDDE AKDNKDIKAT PSKKPRVHWT SELQQKFVEA IERIDRRKNP DARFRPVDGL  240
GEVQVVPKDI LDEMRKMGVT GLTRQNVSSH LQKHRTNKKK QGESLELRTR HPGLSTTNYS  300
SPGQYSSPSI GSNAAPLTAP NHHLYSRNFS MPNNYFSIGQ PVGPLPIGPM AQQLTLPLNH  360
IQSPLWSSSL HHVIGSATPA NLQFMRPPSI FGNQNQELIP GPHLVNQSTT DQRQFIAACP  420
YGSESPCVSN CPQEPEPPNI INSTLPIHQS FNNYGVQDAA LQIPTAELNV PSYPSQHTDV  480
GSGTTAATQQ EASFNVQSFV APTSLNQLTD IGPLGFEDLD LPWFEPIEW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.17e-46ARR-B family protein