PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM72429.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TALE

Protein Properties

Length: 338aa MW: 38129.1 Da PI: 4.7673

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM72429.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.2	1.6e-09	271	304	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++++gL+++q+ +WF N+R ++ OWM72429.1 271 WPYPTEEEKLKLSESTGLDQKQINNWFINQRKRH 304 58*****************************885 PP
2	ELK	27.4	7.5e-10	224	245	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 E K+ L++KYsg+L+sL+ EF+ OWM72429.1 224 EMKEILRNKYSGCLSSLRREFL 245 56888****************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MEDLYRNIVV GSSTVEGFHH HHHQFEGSSA YDNNNNYDDN DNKNELTEEL EGAKVEAAAA 60 AAAESENMSD LIKSQIATHL LYPELVSAYI SCRKVGAPPE IATLLEEIGR VENQRLIMSN 120 CAELGADPQL DEFMESYCEV LHRYKEELSK PFDEATIFLK DIESQLNNLC RDNPTSTLLG 180 SSNSHSHFHS ADEAAGASED EQSCGEAEAP EAQSLGASSR SDREMKEILR NKYSGCLSSL 240 RREFLKKRKN GKLPKDARAA LLEWWNTHYR WPYPTEEEKL KLSESTGLDQ KQINNWFINQ 300 RKRHWKPSED MRFALMEGVG GSMPLYYDTG DGGGHQCT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	240	249	LRREFLKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	2e-81	TALE family protein