PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM72860.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 773aa MW: 86556.1 Da PI: 7.2128

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM72860.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.2	0.0012	522	537	1	16
EEETTTTEEESSHHHH CS zf-C2H2 1 ykCpdCgksFsrksnL 16 ++C++C+k++s+k+n+ OWM72860.1 522 FECQICNKTYSSKDNY 537 89***********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 773 aa Download sequence
MGRRVVIVGA GISGLLACKY TIEKGFNPVV FEAKSSIEEV CLEHTKQPSE LENSRQDLRF 60 SDFDWPSPSG GEDGVPVHTE VFEYVNAYAR NFGLLPHIRL NCQVTGIRYV GETEWEMEMW 120 DRWGGTGTAF GSSGNWHVSV HNKETDSIEV HQAEFVILCI GRFTGLPDIP ELSPGQSIER 180 FRGKVLESME YSALDNLEAA ELIKRKLITV IGSGKSAVDI AAECADTNGA VYPCTMIQLT 240 PHWVLPGDSL WGAHMGYLYS NRFAELLVHQ PGESSLHSLL ATLFLPLGWG ITKFTESYLR 300 WKLPLGKYGM IPDHSFLQDV SSGSIFSLPE DFYDKVEKGN IILKRSRGFG FAEEGVILER 360 EDRPIRTDLA ILATSYKADR KLINIFESPI LQKYIAHSPT SVIPLFRQTI HPRIPCLAVI 420 GHAESMSSLP LFEIRCQWLA QFLDGKFELP SIKEMEKDVN AWEGHMKQYP GRKFWMSRGG 480 EITTEQNRTP NTEIFSCPIC YKPLTRKGLP GLNLRAIYWS AFECQICNKT YSSKDNYLDL 540 TIVAGLKKYS EIKPPWTELF RFPLVSFLYE RGWRQNFKRG GFPGPDEEFE MAQRYFRPAE 600 GGLLVDVSCG SGLFSRRFAK SGTYSGVIAL DFSENMLRQC YDFIKSDSAA MDANLALVRA 660 DVARLPFASG SVDAVHAGAA LHCWPSPSNA NSPASNSAIL LKTIKILNLR QSVSTKGGDT 720 DLISSEQMRK RSSEQRLYFT GTVVVDMVRA AILGRRRAIL LSFQQKLGAG QLI

Sequence ? help Back to Top

Protein Sequence Length: 773 aa Download sequence

MGRRVVIVGA GISGLLACKY TIEKGFNPVV FEAKSSIEEV CLEHTKQPSE LENSRQDLRF  60
SDFDWPSPSG GEDGVPVHTE VFEYVNAYAR NFGLLPHIRL NCQVTGIRYV GETEWEMEMW  120
DRWGGTGTAF GSSGNWHVSV HNKETDSIEV HQAEFVILCI GRFTGLPDIP ELSPGQSIER  180
FRGKVLESME YSALDNLEAA ELIKRKLITV IGSGKSAVDI AAECADTNGA VYPCTMIQLT  240
PHWVLPGDSL WGAHMGYLYS NRFAELLVHQ PGESSLHSLL ATLFLPLGWG ITKFTESYLR  300
WKLPLGKYGM IPDHSFLQDV SSGSIFSLPE DFYDKVEKGN IILKRSRGFG FAEEGVILER  360
EDRPIRTDLA ILATSYKADR KLINIFESPI LQKYIAHSPT SVIPLFRQTI HPRIPCLAVI  420
GHAESMSSLP LFEIRCQWLA QFLDGKFELP SIKEMEKDVN AWEGHMKQYP GRKFWMSRGG  480
EITTEQNRTP NTEIFSCPIC YKPLTRKGLP GLNLRAIYWS AFECQICNKT YSSKDNYLDL  540
TIVAGLKKYS EIKPPWTELF RFPLVSFLYE RGWRQNFKRG GFPGPDEEFE MAQRYFRPAE  600
GGLLVDVSCG SGLFSRRFAK SGTYSGVIAL DFSENMLRQC YDFIKSDSAA MDANLALVRA  660
DVARLPFASG SVDAVHAGAA LHCWPSPSNA NSPASNSAIL LKTIKILNLR QSVSTKGGDT  720
DLISSEQMRK RSSEQRLYFT GTVVVDMVRA AILGRRRAIL LSFQQKLGAG QLI