PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM72991.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 392aa MW: 44262.9 Da PI: 4.6991

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM72991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	112.4	3e-35	14	105	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++d+++++++swsen++sfvv+d+ efa+ +LpkyFkhsnf+SF+RQLn+YgF+k++ e+ weF+++ F +g+ +ll++i+ OWM72991.1 14 FLSKTYEMVDDSSTDSIVSWSENNKSFVVWDPPEFARVLLPKYFKHSNFSSFIRQLNTYGFRKSDPEK---------WEFANDGFIRGQPNLLRNIH 101 9************************************************************99988.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k OWM72991.1 102 RRKP 105 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MDDTMTSCGS LPPFLSKTYE MVDDSSTDSI VSWSENNKSF VVWDPPEFAR VLLPKYFKHS 60 NFSSFIRQLN TYGFRKSDPE KWEFANDGFI RGQPNLLRNI HRRKPVHSHS GQNVQTQGTV 120 QPLTESERQG LKDDMERLKN EKESLVSEVQ KHEKERAELD IQVRGLKDRF HSMEQRHKSM 180 VSNLADVLQK PGLALTLLFE SEPNDRKRRL PRLGYLQDEG NGEESSPGTS QISGKENSDG 240 ASSGLTSMMD LYDQLESSLT IWENIMSDAS QTFDHCFSIS NNLELDEAAS CAECPAIDMN 300 SEPAVPPASE PPGPAPSKEQ KEANPVTTGV NDVFWEQFLT ENPGSSETQE VQSERKDKNE 360 GKSSTDGRYW WSVRTVNYLA EQMGHLTPAE RT

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MDDTMTSCGS LPPFLSKTYE MVDDSSTDSI VSWSENNKSF VVWDPPEFAR VLLPKYFKHS  60
NFSSFIRQLN TYGFRKSDPE KWEFANDGFI RGQPNLLRNI HRRKPVHSHS GQNVQTQGTV  120
QPLTESERQG LKDDMERLKN EKESLVSEVQ KHEKERAELD IQVRGLKDRF HSMEQRHKSM  180
VSNLADVLQK PGLALTLLFE SEPNDRKRRL PRLGYLQDEG NGEESSPGTS QISGKENSDG  240
ASSGLTSMMD LYDQLESSLT IWENIMSDAS QTFDHCFSIS NNLELDEAAS CAECPAIDMN  300
SEPAVPPASE PPGPAPSKEQ KEANPVTTGV NDVFWEQFLT ENPGSSETQE VQSERKDKNE  360
GKSSTDGRYW WSVRTVNYLA EQMGHLTPAE RT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	205	210	DRKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18880.1	1e-114	HSF family protein