PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM72992.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 197aa    MW: 22644.4 Da    PI: 10.7786
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM72992.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B343.17.4e-14271041694
                 EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3  16 lvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 l +p  f++++ g  ++ + ++  d es  sW+vkl  rk++  ++lt+GW++ v++ +Lk gD ++Fkl++++  e vv
  OWM72992.1  27 LKVPLAFVKNFRGTLPNRICVKSDDlESAISWRVKL--RKNGTDCYLTNGWEKIVRDLKLKLGDLLIFKLVSEEALEVVV 104
                 788999998886665555667777766669******..*******************************99877665444 PP
2B334.92.8e-111231853293
                 --SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
          B3  32 esktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                 ++   +++ ++gr+W v ++  +k+ +r  +++GW++F ++n L   D++ + ++g ++   +
  OWM72992.1 123 SKESAVIRGPDGRKWHVAMKQqTKGYRRLRFSRGWSKFIRDNSLLPEDTLCLDFKGGKNNLIK 185
                 44568999***********776888888***********************999886555444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MGRGPSPKRK KSPSFFKLFL GDFPTKLKVP LAFVKNFRGT LPNRICVKSD DLESAISWRV  60
KLRKNGTDCY LTNGWEKIVR DLKLKLGDLL IFKLVSEEAL EVVVYDPTCC EKEIVATAAE  120
QWSKESAVIR GPDGRKWHVA MKQQTKGYRR LRFSRGWSKF IRDNSLLPED TLCLDFKGGK  180
NNLIKTQISR ARHTARR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.11e-09B3 family protein