PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73000.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 327aa MW: 36484.3 Da PI: 8.8639

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73000.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.6	1.7e-55	12	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeel+++yL +k+++ +++ ++i++vd++k+ePwdLp k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ ++e OWM73000.1 12 LPPGFRFHPTDEELITFYLMNKISDANFTG-RAITNVDLNKCEPWDLPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNStTSE 109 79***********************999.89***********99999************************************987888 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 lvg+kktLvfy+grap+gekt+Wvmheyr+ OWM73000.1 110 LVGMKKTLVFYRGRAPRGEKTNWVMHEYRI 139 9*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MEGESKGKEE TLPPGFRFHP TDEELITFYL MNKISDANFT GRAITNVDLN KCEPWDLPGK 60 AKMGEKEWYF FSLRDRKYPT GVRTNRATNT GYWKTTGKDK EIFNSTTSEL VGMKKTLVFY 120 RGRAPRGEKT NWVMHEYRIH SKSSFRTTKD EWVVCRVFQK SAGAKKYPTN QSRAIPPYSL 180 EIGPSIVPPT MMPANENFQF LGRNYPCGPD LSELNRVLRS GSIGMNPQMQ APFNPAAGAA 240 GCFTISGLNL NLGGATSGQP VLRPMQPPPG LNPQEVANSS MMATTNLGPE TSYGGDINNA 300 SVPSNRFMGM DHCMDLDGYW PSYQLDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-117	NAC family protein