PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73246.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 359aa MW: 39826.2 Da PI: 8.4413

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73246.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.9	9.7e-54	10	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.... 95 lppGfrFhPtdeel+ +yL+kkv++ +l++ ++i+evdiyk++Pw+Lp k++ +ekewyfFs+rd+ky++g r+nra++sgyWkatg+dk ++++ OWM73246.1 10 LPPGFRFHPTDEELILHYLQKKVSSIPLPV-SIIAEVDIYKFDPWELPDKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKVIMTSasrg 107 79**************************.89***********888889***********************************998988 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e++g+kk Lvfy+gr pkg+kt+W+mheyrl OWM73246.1 108 aQNENIGVKKALVFYRGRPPKGTKTNWIMHEYRL 141 87888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MTMKNPQSSL PPGFRFHPTD EELILHYLQK KVSSIPLPVS IIAEVDIYKF DPWELPDKAA 60 FGEKEWYFFS PRDRKYPNGA RPNRAAASGY WKATGTDKVI MTSASRGAQN ENIGVKKALV 120 FYRGRPPKGT KTNWIMHEYR LTESPCTLTP TNRPTRLKDS SMRLDDWVLC RIYKKLNALS 180 PAAAVPTINL DQEEEECLIS AQDTKLPGLT GVPSNSTGNT LMSQKSSSFS NLLDAMDYAM 240 LSSFLSDSST QLNSLSCLEP SDSTLTHVVA PNTDREHHMV PAISPSGPVI QNALKRQRAG 300 IEAEMSHPSK KFPGPTCSFL TSGAAGTQFD VPGQYNYMFN THSYLNQQLL LSPNVPFLG

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MTMKNPQSSL PPGFRFHPTD EELILHYLQK KVSSIPLPVS IIAEVDIYKF DPWELPDKAA  60
FGEKEWYFFS PRDRKYPNGA RPNRAAASGY WKATGTDKVI MTSASRGAQN ENIGVKKALV  120
FYRGRPPKGT KTNWIMHEYR LTESPCTLTP TNRPTRLKDS SMRLDDWVLC RIYKKLNALS  180
PAAAVPTINL DQEEEECLIS AQDTKLPGLT GVPSNSTGNT LMSQKSSSFS NLLDAMDYAM  240
LSSFLSDSST QLNSLSCLEP SDSTLTHVVA PNTDREHHMV PAISPSGPVI QNALKRQRAG  300
IEAEMSHPSK KFPGPTCSFL TSGAAGTQFD VPGQYNYMFN THSYLNQQLL LSPNVPFLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	1e-104	NAC family protein