PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73326.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

HSF

Protein Properties

Length: 432aa MW: 49473.8 Da PI: 4.8769

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73326.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.9	1.2e-36	15	105	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++++ l+sws+ng sf+v+++ ef++++Lp+yFkh+nf+SFvRQLn+YgF+kv+ ++ weF++++F +g+k+ll++i OWM73326.1 15 FLTKTYDMVDDPQTNYLVSWSDNGCSFIVWNPPEFSRELLPQYFKHNNFSSFVRQLNTYGFRKVDPDQ---------WEFANEEFIRGEKHLLKNIY 102 9**************************************************************999.........****************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k OWM73326.1 103 RRK 105 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MEAESQSKAV APAPFLTKTY DMVDDPQTNY LVSWSDNGCS FIVWNPPEFS RELLPQYFKH 60 NNFSSFVRQL NTYGFRKVDP DQWEFANEEF IRGEKHLLKN IYRRKPIHSH SLQNVPLHDS 120 EKQMYEDEIK RLQNENSLLQ SELQRHRGEN PASIEIQVQF LGKRLHEMES KQAQLVTFLV 180 ELMRNPRFPS TLADQSDDRG KRRRLLELDQ LELNNSSKDR GAAPLLDLNS VEKLQNSLNV 240 CENFLQGVGQ KMAEEENDFG SSSRPPPLVI PTNRESSGDS ERNIHTWSPR SPPSSSSKDV 300 RSMSPELGAS LDQVDSPTTS SVYLNVDISL KSSVIDVNSE PCNNNISEIE KNLSEQVREK 360 IPGAPQEMND VFWEQFLTET PRPSDSQEVQ SDRTDGTDTV SKPASHGKFW WNAHYDIDFI 420 KQFGSHAVDE RT

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MEAESQSKAV APAPFLTKTY DMVDDPQTNY LVSWSDNGCS FIVWNPPEFS RELLPQYFKH  60
NNFSSFVRQL NTYGFRKVDP DQWEFANEEF IRGEKHLLKN IYRRKPIHSH SLQNVPLHDS  120
EKQMYEDEIK RLQNENSLLQ SELQRHRGEN PASIEIQVQF LGKRLHEMES KQAQLVTFLV  180
ELMRNPRFPS TLADQSDDRG KRRRLLELDQ LELNNSSKDR GAAPLLDLNS VEKLQNSLNV  240
CENFLQGVGQ KMAEEENDFG SSSRPPPLVI PTNRESSGDS ERNIHTWSPR SPPSSSSKDV  300
RSMSPELGAS LDQVDSPTTS SVYLNVDISL KSSVIDVNSE PCNNNISEIE KNLSEQVREK  360
IPGAPQEMND VFWEQFLTET PRPSDSQEVQ SDRTDGTDTV SKPASHGKFW WNAHYDIDFI  420
KQFGSHAVDE RT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	201	205	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	7e-60	HSF family protein