PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73360.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 254aa    MW: 28055.2 Da    PI: 5.9021
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding568.8e-18345145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +++W++eE+ llv+a+++ G++ W+ Ia+ ++ gRt++ +k++w+
       OWM73360.1  3 KDSWSEEEERLLVEAHEKIGNR-WAEIAKDIP-GRTENTIKNHWN 45
                     679*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MQKDSWSEEE ERLLVEAHEK IGNRWAEIAK DIPGRTENTI KNHWNAAKRR QNSRRKNKAT  60
LNKPDPHPSV LEDYIRRKNL SAKPSTTNAA LKSAPIQGST ANAAVTASGS GSTLSDEPWS  120
NEEPTLNMLP ELSGIADYDE ELLFMQKFFT GNFHQPLLGP TQLLLPALDS CNTPQSSNIS  180
VSNSNHEPSF LHPNLFVPYL PANEAPSAPA IQYYGFEDKG LMHLNDSQAP TCTGKREVDL  240
MQVASSSQLS RSGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11050.13e-23MYB family protein