PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73367.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TCP

Protein Properties

Length: 343aa MW: 35993.7 Da PI: 7.1805

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113.7	2.5e-35	24	127	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......ssssasec.....eaesssssasnsssg. 88 + +kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LGfd++sk+++WL+++ak +i++l+++ s + +a++ sss++ OWM73367.1 24 TSRKDRHSKVYTSKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIRKAKSSIDKLADLppwhpnS------TstagpTAAATSSSGE----Mp 112 789*************************************************************6555441......3222222222222222....12 PP TCP 89 ..............k 89 OWM73367.1 113 laeqpelaggyagaG 127 222334444454441 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MKGSGGGGGG EIVQVQGGHI VRATSRKDRH SKVYTSKGPR DRRVRLSAHT AIQFYDVQDR 60 LGFDRPSKAV DWLIRKAKSS IDKLADLPPW HPNSTSTAGP TAAATSSSGE MPLAEQPELA 120 GGYAGAGSSS FMPPPPQLDD SDTMKLFFPT SNAEPSQSIS FTGYSVPHEM VARAPQQSED 180 LGLSLHSFQD SSGGLQSSSS RALFVGTGAD AFEPGCSHYP RMMGWGGDAG TEEGRGGSSQ 240 GFFMNQGGGS ALMMVNPQRG PLQSSFTGGF DELPIAIPSD NHHQKPPVVA VHQPPFFGGR 300 LGSDSLSGFY FPTRVHGSSG NEEPSGIVSG RPSSSASPSS SHR

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MKGSGGGGGG EIVQVQGGHI VRATSRKDRH SKVYTSKGPR DRRVRLSAHT AIQFYDVQDR  60
LGFDRPSKAV DWLIRKAKSS IDKLADLPPW HPNSTSTAGP TAAATSSSGE MPLAEQPELA  120
GGYAGAGSSS FMPPPPQLDD SDTMKLFFPT SNAEPSQSIS FTGYSVPHEM VARAPQQSED  180
LGLSLHSFQD SSGGLQSSSS RALFVGTGAD AFEPGCSHYP RMMGWGGDAG TEEGRGGSSQ  240
GFFMNQGGGS ALMMVNPQRG PLQSSFTGGF DELPIAIPSD NHHQKPPVVA VHQPPFFGGR  300
LGSDSLSGFY FPTRVHGSSG NEEPSGIVSG RPSSSASPSS SHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	7e-41	TCP family protein