PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73437.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

RAV

Protein Properties

Length: 321aa MW: 37591.3 Da PI: 7.7045

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73437.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	28.5	3.8e-09	20	66	2	54
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 +++GV + +g W A+I+ + +r++lg+f t+ eAa a++ a kl+ OWM73437.1 20 KFRGVLPQP-NGNWGAQIYA------NhQRIWLGTFRTETEAAMAYDSASIKLR 66 789997677.8****999......44******99*******99998 PP
2	B3	84.1	1.3e-26	146	241	1	83
EEEE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 f k+ltpsdv+k++rlv+pkk+a +h ++ +++l++ d+ ++W+++++y+k+s+++v+t+GW++Fv++++L+++D+v+F+ OWM73437.1 146 FHKELTPSDVGKLNRLVIPKKYAVKHfpcimesrnghegRENYVDDTELVFHDRLMKVWKFRYCYWKSSQSFVFTRGWNQFVREKELRAKDVVTFY 241 89**************************999987766333348899*********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MVLQSRKRQR HDQRTGPSVK FRGVLPQPNG NWGAQIYANH QRIWLGTFRT ETEAAMAYDS 60 ASIKLRRGDT QRNFPVTQYT CLEPTFQDNF TEEEILDRIK DGTYQSKFRD FIRNLSGNQG 120 KTKDALCHPQ RRMNSNSGQI SCRQLFHKEL TPSDVGKLNR LVIPKKYAVK HFPCIMESRN 180 GHEGRENYVD DTELVFHDRL MKVWKFRYCY WKSSQSFVFT RGWNQFVREK ELRAKDVVTF 240 YTCTYVNRAE KEADAFLLID VNYFEGECND NGMEPPLQNK EELELKLGKG CSLGVYDNEE 300 AEEEECKEEE NGVRLFGVQI N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51120.1	2e-96	RAV family protein