PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73484.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

FAR1

Protein Properties

Length: 745aa MW: 86047.6 Da PI: 7.4017

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73484.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.1	4.7e-26	29	115	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+eYA+ +GF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk+ k+gkw v+++++eHnHel p OWM73484.1 29 SFYKEYARCMGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRGKNGKWFVYSFVKEHNHELLP 115 5**************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 745 aa Download sequence
MTDSGDAMAH SIMEPRDDME FESHEAAYSF YKEYARCMGF GTAKLSSRRS RASKEFIDAK 60 FSCIRYGNKQ QSDDAINPRP SPKIGCKASM HVKRGKNGKW FVYSFVKEHN HELLPAQVHF 120 FRSHRDADPV KSDRLRKRKN LALVSKLCNA YQSFDSLENY MRNPHDKGRR LVLETGDAQM 180 LLEHLMQMQE ENPQFFYAVD LNEEHRLRNV FWVDAKGMED YAKFGDVVCI DTTCYANKYK 240 IPLVLFVGVN RHVQPTLFGC ALIADDTVFT FVWLIQTWFV AMGERAPQVI LSDQNNALKA 300 AVAEISPGTR HCFCLWHILD KIPRQLEYLS LWHDAFMVKF NKCIFRSWTE AEFEKRWRKL 360 LDRFNLREVE WVQLLYHNRM HWVPTFIRDI SFVGLSTTSR AESVNSWFDK YVHEETSLRE 420 FIEKYKVILE DRYEEEAKAD FDAWHETPEL KSPSPFEKQM SLVYTHEIFK KFQVEVLGAA 480 ACHLKKENED ERAATYVVKD FEENQNYLVE WSESKSSIYC SCRSFEYKGY LCRHAIVVLQ 540 MSGCFSIPSR YILQRWTNAA LSRHAIGEKL EEVPSKVRRY NDLCRRAIIL GQEGSISQES 600 YNIALHAIKE AMKQCANVNN LVESETQPIG LSVVTVSEPD EVNQSQEQSK NQAADSRAST 660 RSKAPRKSDL GKEKAASENH SGKNGKVPQQ DPRIAAMLDG LHSTGLSEGR SENTHNMVPT 720 IFHNLAPAQF HGVASMHLHE NQLPQ

Sequence ? help Back to Top

Protein Sequence Length: 745 aa Download sequence

MTDSGDAMAH SIMEPRDDME FESHEAAYSF YKEYARCMGF GTAKLSSRRS RASKEFIDAK  60
FSCIRYGNKQ QSDDAINPRP SPKIGCKASM HVKRGKNGKW FVYSFVKEHN HELLPAQVHF  120
FRSHRDADPV KSDRLRKRKN LALVSKLCNA YQSFDSLENY MRNPHDKGRR LVLETGDAQM  180
LLEHLMQMQE ENPQFFYAVD LNEEHRLRNV FWVDAKGMED YAKFGDVVCI DTTCYANKYK  240
IPLVLFVGVN RHVQPTLFGC ALIADDTVFT FVWLIQTWFV AMGERAPQVI LSDQNNALKA  300
AVAEISPGTR HCFCLWHILD KIPRQLEYLS LWHDAFMVKF NKCIFRSWTE AEFEKRWRKL  360
LDRFNLREVE WVQLLYHNRM HWVPTFIRDI SFVGLSTTSR AESVNSWFDK YVHEETSLRE  420
FIEKYKVILE DRYEEEAKAD FDAWHETPEL KSPSPFEKQM SLVYTHEIFK KFQVEVLGAA  480
ACHLKKENED ERAATYVVKD FEENQNYLVE WSESKSSIYC SCRSFEYKGY LCRHAIVVLQ  540
MSGCFSIPSR YILQRWTNAA LSRHAIGEKL EEVPSKVRRY NDLCRRAIIL GQEGSISQES  600
YNIALHAIKE AMKQCANVNN LVESETQPIG LSVVTVSEPD EVNQSQEQSK NQAADSRAST  660
RSKAPRKSDL GKEKAASENH SGKNGKVPQQ DPRIAAMLDG LHSTGLSEGR SENTHNMVPT  720
IFHNLAPAQF HGVASMHLHE NQLPQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	138	DRLRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein