PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73491.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 292aa MW: 32924.9 Da PI: 5.097

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73491.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.6	7.7e-15	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ +ar g+ R++k+c++rw +yl OWM73491.1 22 KGLWSPEEDEKLMRYMLSNGQGCWSDVARNAGLQRCGKSCRLRWINYL 69 678*******************************************97 PP
2	Myb_DNA-binding	52.6	1e-16	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+el+++++ +lG++ W+ Ia++++ gRt++++k++w++ OWM73491.1 75 RGAFSPQEEELIIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 118 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MRKPEKKNGG GNGKNGDVKL RKGLWSPEED EKLMRYMLSN GQGCWSDVAR NAGLQRCGKS 60 CRLRWINYLR PDLKRGAFSP QEEELIIHLH SLLGNRWSQI AARLPGRTDN EIKNFWNSTI 120 KKRLRTSSSE PKEVMEAGGG LIFLQEQGIN HSMPLMYMES LLSSSSSSTS SLQHIDGPNY 180 QMVLDPKLEI PFMAQAAGNF EGIERDQLFV PLPQLESTIN SFIEENAKAE NTTSDSNISS 240 DNVLFNNINS FSVTDNLNNY VGNPEETKTV GEWDLEELLK DVSNFPSFID FQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12870.1	1e-62	MYB family protein