PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73526.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

ERF

Protein Properties

Length: 555aa MW: 60582.3 Da PI: 8.7055

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73526.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	55	2e-17	85	135	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + ++GVr++ +g+WvAeIr+ps r r +lg+f ta eAa a+++a+ +++g OWM73526.1 85 CSFRGVRQRT-WGKWVAEIREPS----RgSRLWLGTFPTALEAALAYDNAASAMYG 135 579**999.******84....36********************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
MESPSASASA PALDQISKSA AEILAQWKQY EKVTTCILGS GTAAATAADL SPKTAAARVP 60 TRRVHAKGSK KGCMKGKGGP DNLRCSFRGV RQRTWGKWVA EIREPSRGSR LWLGTFPTAL 120 EAALAYDNAA SAMYGPFARL NFPTNGNDGN DAVNGGPGGA SNNTSKDSSK DSSSSSVAAP 180 SAPPPPSPPP EAANKDALNL DGPFPVNSQL GGISLDLGIA ERPRKHSKTS GSSLSRGVSW 240 PLDGSESLKI EVTVQNGIKA GKDHDKEEPA EKILFDLSKS IISIKEVSDK IAADKAEGSA 300 ESSAASETTF DSSKSVDMIA ASSKITLSES KDLTKWLSNM RKLIHGKSAE VSAETELANL 360 VKSNDEEIQK ARTVLKSLKS MDFKSVSELE FSRSLERALS TLLSEKSPAP NRCSSLYKIW 420 EQISFLCSYF KQAQSDLMEV TKMYTLKDSL QAELDAKTLR FESLQKRETD CDREIKSLEV 480 KISKLQAQLR EVKEMKADNS FEMKKLYKET EEKGAVFSQY LQEEPKWRLK KRKAEGDIER 540 VENDWEDLKK DLPFF

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

MESPSASASA PALDQISKSA AEILAQWKQY EKVTTCILGS GTAAATAADL SPKTAAARVP  60
TRRVHAKGSK KGCMKGKGGP DNLRCSFRGV RQRTWGKWVA EIREPSRGSR LWLGTFPTAL  120
EAALAYDNAA SAMYGPFARL NFPTNGNDGN DAVNGGPGGA SNNTSKDSSK DSSSSSVAAP  180
SAPPPPSPPP EAANKDALNL DGPFPVNSQL GGISLDLGIA ERPRKHSKTS GSSLSRGVSW  240
PLDGSESLKI EVTVQNGIKA GKDHDKEEPA EKILFDLSKS IISIKEVSDK IAADKAEGSA  300
ESSAASETTF DSSKSVDMIA ASSKITLSES KDLTKWLSNM RKLIHGKSAE VSAETELANL  360
VKSNDEEIQK ARTVLKSLKS MDFKSVSELE FSRSLERALS TLLSEKSPAP NRCSSLYKIW  420
EQISFLCSYF KQAQSDLMEV TKMYTLKDSL QAELDAKTLR FESLQKRETD CDREIKSLEV  480
KISKLQAQLR EVKEMKADNS FEMKKLYKET EEKGAVFSQY LQEEPKWRLK KRKAEGDIER  540
VENDWEDLKK DLPFF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	525	533	PKWRLKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05410.2	3e-27	ERF family protein