PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73697.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family C2H2
Protein Properties Length: 307aa    MW: 32900.8 Da    PI: 4.5966
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73697.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.5e-05282304223
                 EETTTTEEESSHHHHHHHHHH.T CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                 +C+ C+k+F++   L++H +  H
  OWM73697.1 282 TCNSCSKTFNSETGLQSHSKAkH 304
                 7*****************88777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MEFWGENSAL SDHVVFASGN AMLDYAWMIG VEVKAGQPIK VEPEDDEIIH ISQATLGESK  60
KKGDESVPLF VNFDNKKLVL GTLSADKFPQ ISFDLVFEKK FELSHNWSGG NMGTDSEEED  120
DFPMSLERNG KVGPGPVAAK PALGNANAAK PKSAEKPKAA EAAKGKGKEK DGDSDEDEDE  180
SAEDDSDEEE ETDSEADSDD DEDSDEDEED ETPKKAEVGK KRSNKSASKT PDAKKAKLVT  240
PQKTDGKKGG HTATPHPAKQ SGKTPASNKK QQQTPKSGGS VTCNSCSKTF NSETGLQSHS  300
KAKHGAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.22e-26C2H2 family protein