PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73736.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

GeBP

Protein Properties

Length: 271aa MW: 30892 Da PI: 8.4851

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73736.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	53	1e-16	53	141	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddid.afyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +f+r++ eeDei+lL+ l +sp + id a +e++ +s+ ++++++ql++K+r+++ K++k++ + + ++++hd++++el++kiWg OWM73736.1 53 RFERIFMEEDEIALLKSLWHNSI---SSPAAKIDpATFEILGRSLGSRFTHNQLSNKLRHMRAKYHKQSLT-----KSYIKTPHDRETYELCRKIWG 141 799*************87643...3556666524689***********************99988.....6789**************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MSTPLTPTTA RLRPASRRRS GPYSPPTPWA DNNHHGEHHD RAPPSADGNR RPRFERIFME 60 EDEIALLKSL WHNSISSPAA KIDPATFEIL GRSLGSRFTH NQLSNKLRHM RAKYHKQSLT 120 KSYIKTPHDR ETYELCRKIW GENKAEPMEE REEVPSQEEV QSQRQSQSCG RNKHMNAAAV 180 EEKGNEEDGV DLGKFPVLVE ECEKALEGNG VWRQVLKCLD EGKMREMNDK LVMLKYEEAG 240 LMAKKAELVQ ELTRMILRAM AASCSSTRTA A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.1	3e-11	GeBP family protein