PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73742.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 313aa MW: 33089.9 Da PI: 6.7789

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73742.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.3	0.0011	133	155	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H OWM73742.1 133 YECKTCSRTFPSFQALGGHRASH 155 99**********99999998887 PP
2	zf-C2H2	13.6	0.0002	211	233	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H OWM73742.1 211 HECSICGSEFSSGQALGGHMRRH 233 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MGGLEAEERP LAGVADDGSL MIIKGKRTKR PRTPSACGGG SITAASSSST SGGSGGGDCD 60 LYPSSSSGTM LESTEEKDMA YCLILLAQGP RRQRDEDQAD AKMESDEFSG SSKKFSEVAT 120 TGGASSRAGF YVYECKTCSR TFPSFQALGG HRASHKKPRP AEDPKKSPTE PNSDEDEEVG 180 QFRKITISPP LSSSIPNFPS KLLQASKPKI HECSICGSEF SSGQALGGHM RRHRAVAAPP 240 TTSGHATMID SVITDHYSHG PRIVGENTSR PGAVLSLDLN LPAPEDDPKF QFAPAPAQKP 300 LLFSGPALVD CHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	4e-52	C2H2 family protein