PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73756.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 233aa MW: 26256.9 Da PI: 9.2573

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73756.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.3	1.3e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rgrW++eEd +l++++ ++G+g +W + +++ g++R++k+c++rw++yl OWM73756.1 14 RGRWSPEEDAKLKEYIDKYGTGgNWIALPHKAGLKRCGKSCRLRWLNYL 62 8**********************************************97 PP
2	Myb_DNA-binding	34	6.8e-11	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + + ++ W+ Ia+ ++ gRt++++k++w++ OWM73756.1 69 GEFSEEEDGIICALYASIRSK-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MGRAPCCDKF NVKRGRWSPE EDAKLKEYID KYGTGGNWIA LPHKAGLKRC GKSCRLRWLN 60 YLRPNIKHGE FSEEEDGIIC ALYASIRSKW SIIAAQLPGR TDNDIKNYWN TKLKKKLIGT 120 LNISRPHEQK MVQPTLPLQS PSLSSVCHSL SSLMQMNSST WYSNCNSNHH LNDAKSSPTA 180 LDFFSFPPSL ANVGPNTRLS ATENPPLFQT HDGLNSMNFL EFGSESELQL LRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	2e-75	MYB family protein