PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM73771.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 253aa MW: 28384.4 Da PI: 5.644

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM73771.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.4	4e-14	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+ eEd++l+ ++k++G +W+ a+ g+ R++k+c++rw +yl OWM73771.1 17 KGAWSGEEDQKLIAYIKRYGIWNWNHMAKPAGLSRSGKSCRLRWMNYL 64 79****************99**********************97 PP
2	Myb_DNA-binding	52.4	1.2e-16	71	112	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 g++T+eE+e +++++++lG++ W++Ia+++ gRt++++k++w+ OWM73771.1 71 GNFTKEEEETIIRLHRKLGNR-WAAIAAKLH-GRTDNEIKNYWN 112 89*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MASSLDYDAD KDVGLKKGAW SGEEDQKLIA YIKRYGIWNW NHMAKPAGLS RSGKSCRLRW 60 MNYLRPNLKH GNFTKEEEET IIRLHRKLGN RWAAIAAKLH GRTDNEIKNY WNARLKKHSK 120 SEEAAAAHSP KNSNIVAAQE ASGGSSSSNS TAATTEPASS EEYNDPAVPL ARLWSNDTET 180 SSGNTTESVF DQVGSPQEQH LLIPVSEGTC MTMEEDFQET MSMIIAAEGF YSPYPNLQES 240 LSREYLIYDL WDN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-45	MYB family protein