PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73894.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 215aa    MW: 24349.4 Da    PI: 6.6832
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73894.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.7e-1975126256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr ++ +g+++AeIrd +    +  r++lg+f+t+e Aa a+++a+ +++g+
  OWM73894.1  75 SYRGVRKRP-WGKYAAEIRDSTR---HgVRVWLGTFDTPEAAALAYDQAAFSMRGA 126
                 69*******.**********422...25*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MYKKSPSVSW DELLFNHGSL PFDVHDSEEM LLLDVISRGA TESSESESSS VPKEEEVTST  60
SDFVQNGDDP RKEKSYRGVR KRPWGKYAAE IRDSTRHGVR VWLGTFDTPE AAALAYDQAA  120
FSMRGAMAVL NFPLERVKES LREMKYKVEE GCSPVVALKR RHCMRRKSQS RKNKPKESLS  180
KPVKAENVVV FEDLGPDYLE ELLSSSESSA HTCPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-64ERF family protein