PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM73956.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ZF-HD
Protein Properties Length: 79aa    MW: 8358.27 Da    PI: 9.1029
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM73956.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer80.52.1e-252578258
  ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                 ++vrY eC++N Aas+Ggh vDGC+ f++s   ++ a+++ Ca CgCHRnFHR+ ve
   OWM73956.1 25 TNVRYAECQRNYAASTGGHIVDGCRAFVAS---SSGANSFACASCGCHRNFHRKVVE 78
                 689**************************9...44589****************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MKKVVLVRRE ATDSSSSPSS SSAATNVRYA ECQRNYAAST GGHIVDGCRA FVASSSGANS  60
FACASCGCHR NFHRKVVEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.11e-20ZF-HD family protein