PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM74373.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 230aa    MW: 25281.4 Da    PI: 4.5859
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM74373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.7e-182777155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++ykGVr +k +g+Wv+eIr p++   r r++lg++++ae+Aa+a +aa  +l+g
  OWM74373.1 27 CKYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDSAEKAARAFDAALFCLRG 77
                79*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MVKQSPDPKP AGTTESTGSA SSSPSSCKYK GVRKRKWGKW VSEIRLPNSR ERIWLGSYDS  60
AEKAARAFDA ALFCLRGRSA RFNFPDNPPD IAGARSLSHA EIQAAAARFA NSTMHSSSSS  120
NALTQTHSED SDRSTSPSPS VSDGTMQMDS DLSLDALNGS CWDLQTNNNN SNNNTTNSME  180
LDNYYPSEYG IFQGFDDLSN DFYVPTMDPS DHGEENYDGV LAQEPFLWNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13036KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.16e-53ERF family protein