PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM74442.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 317aa MW: 35735.2 Da PI: 7.4762

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM74442.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed++l d++k +G g+W+ +++ g++R++k+c++rw++yl OWM74442.1 14 RGAWTAQEDKILCDYIKAHGEGRWRNLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	45.3	2e-14	67	150	1	47
TSSS-HHHHHHHHHHHHHTTTT......................................-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg......................................tWktIartmgkgRtlkqcksrwqky 47 rg+ +++E+el+++++k+lG++ +W++Ia +++ gRt++++k++w++ OWM74442.1 67 RGNISPDEEELIIRLHKLLGNRflfgltqiiivsclvighfflragsqsydflsslslisRWSLIAGRLP-GRTDNEIKNYWNTN 150 7899****************************************************************.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MGRSPCCSKE GLNRGAWTAQ EDKILCDYIK AHGEGRWRNL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SPDEEELIIR LHKLLGNRFL FGLTQIIIVS CLVIGHFFLR AGSQSYDFLS 120 SLSLISRWSL IAGRLPGRTD NEIKNYWNTN LGKRHQDHHA SDDRSTKLPL DTAKKRAEPV 180 AVRTKALKCS KQVFLNVSRA ETPDRLNSNQ TSSETRDHQT NMPPGPNPGD SNNGQSSLTN 240 SEDNNISADD SMLDFNIGEL CLSDLLNFAD FSTSLACSSD HQPDVMLYEE LETNVGLNMH 300 PFASFLDYYT GEDQWLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	2e-51	MYB family protein