PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM74464.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 247aa    MW: 28551.7 Da    PI: 8.4873
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM74464.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.8e-189101197
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ffkv+    + +++rl++p  + ++++g+k++     l  +sg +W+v l    +k s++ +++ GW  Fvk++ ++ gD ++F+++g+s+f  +v +f
  OWM74464.1   9 FFKVF--LETQSKNRLRIPPAYHKHMEGEKRQ--VFCLLGPSGDTWQVILVKvlEKDSNELYFRHGWATFVKDHLIENGDLLLFRYIGESNF--NVEIF 101
                 78888..889999*********9777888666..7***************6678**********************************9999..77776 PP
2B354.42.2e-171582321388
                 TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.S CS
          B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.s 88 
                 s +  +p +fa+++g+ ++     tl d+sg++W v+l+ r ++ +  + +GW+eF ++n++k gD++vF+l +  +
  OWM74464.1 158 SMWPNIPMRFARSYGLLQKH--CATLVDPSGEQWLVELRLRARPHQLNMYSGWREFSSSNDIKIGDTCVFELLHGpE 232
                 555679********766444..49999********************************************664322 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MADSGRLQFF KVFLETQSKN RLRIPPAYHK HMEGEKRQVF CLLGPSGDTW QVILVKVLEK  60
DSNELYFRHG WATFVKDHLI ENGDLLLFRY IGESNFNVEI FGCSGCPKEA SFRVRCSQGR  120
RSSAPARCSF SQNPKFTTTI NESNERLGYV VINRVFFSMW PNIPMRFARS YGLLQKHCAT  180
LVDPSGEQWL VELRLRARPH QLNMYSGWRE FSSSNDIKIG DTCVFELLHG PEDSQSFSMM  240
VHINELP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.19e-17B3 family protein