PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM74465.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 153aa    MW: 17582.2 Da    PI: 8.0975
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM74465.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.41.5e-149102199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ffkv+    + ++ rl++p   + +++g+k++     l  +sg  W+v+l    +k s++ ++t GW  Fvk+n ++ g  ++F++ g  e + +v +f
  OWM74465.1   9 FFKVF--VETQSKERLRIPVYLM-HMEGQKPQ--VFCLSGSSGDAWQVNLVEvlEKDSDELYFTHGWATFVKDNLIEHGHLLLFQYAG--ELNIKVEIF 100
                 78888..66778889*****999.67778555..79999***********5577*******************************987..777799999 PP

                 -S CS
          B3  98 rk 99 
                 ++
  OWM74465.1 101 SR 102
                 87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MSDPSRLKFF KVFVETQSKE RLRIPVYLMH MEGQKPQVFC LSGSSGDAWQ VNLVEVLEKD  60
SDELYFTHGW ATFVKDNLIE HGHLLLFQYA GELNIKVEIF SRSGCPKEAA FHARCSQSKN  120
IPIRFARSYG LLQKHFVTLV DPSRGQWLGE LGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.12e-13B3 family protein