PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM74466.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 250aa    MW: 28432.8 Da    PI: 9.161
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM74466.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.41.1e-179102199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ffk ++ s   ++  l +p  +++ ++g k  ++ + l  +sg++W+v l+  + k+++ +++ GW +Fvk++ Lk+gD ++F+  g  + +++v +f+
  OWM74466.1   9 FFKFFLVS--QSKEHLKIPQAHCKLIKGWK--PRIVLLSGPSGNTWRVSLSQdQEKPDELYFKHGWPRFVKDHSLKDGDLLLFQCLG--KSKYKVEIFD 101
                 56666333..344459*******9997775..44688888**********887888888*************************777..4456999998 PP

                 S CS
          B3  99 k 99 
                  
  OWM74466.1 102 P 102
                 6 PP
2B354.91.6e-17153247398
                 EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS
          B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98 
                 k  ++  +++++ + +pk+fa ++ +      ++tl+d+sg+ W  k++++ +++  +++ +GW eF+k+n+Lk gD++ ++l  g+ ++ +l+++v++
  OWM74466.1 153 KFNMTICNSQHAYMNIPKHFAMSNALL----NKVTLQDPSGKLWPAKIRFQVRPCPqFIIFDGWYEFCKSNKLKIGDICALELLpGNeESDNLLMSVCK 247
                 5567777889999********999644....47***************99555554466777********************87788899999999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MSDPRTLKFF KFFLVSQSKE HLKIPQAHCK LIKGWKPRIV LLSGPSGNTW RVSLSQDQEK  60
PDELYFKHGW PRFVKDHSLK DGDLLLFQCL GKSKYKVEIF DPSGCPKEAA FNGNSFQGTF  120
NIEKCRGWTS GKSCKGDHDS SEAGEPSSAR TLKFNMTICN SQHAYMNIPK HFAMSNALLN  180
KVTLQDPSGK LWPAKIRFQV RPCPQFIIFD GWYEFCKSNK LKIGDICALE LLPGNEESDN  240
LLMSVCKLNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.12e-17B3 family protein