PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM74467.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 396aa    MW: 44989.2 Da    PI: 9.5793
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM74467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3581.7e-18381171398
                 TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 +++l +pkkfae++++k   +  + l+ +sg  W+v l      g+ ++++GW+eFvk++ L e+D+++F+++g+s+f   v +f+
  OWM74467.1  38 QKQLAMPKKFAENMKNK--LGENVFLKGPSGSIWKVGL--AAEEGGLFFKRGWEEFVKDHPLAENDVLMFRFSGNSRF--EVLMFD 117
                 45799******666544..6679***************..99********************************9999..777666 PP
2B347.82.7e-15280367192
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f  v+ p +v k+  l++p + a++h g  ++++ l++   + ++W+ +++y +++ g+  +++GW++F+ +n L+e D+++F l ++ +++ 
  OWM74467.1 280 FSVVMQPTHVYKRFYLSIPVQWADKHLGRCHQNIILRV---KDKTWKTRYNYtSRNCGG--ISGGWRSFALDNYLQESDVCLFDLGDSIDGTV 367
                 6678999*******************878666555554...55*******996555555..899********************876644433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MEEDDETCKQ DCRRWEEDIY WTHFRSIHFF QFLRGDFQKQ LAMPKKFAEN MKNKLGENVF  60
LKGPSGSIWK VGLAAEEGGL FFKRGWEEFV KDHPLAENDV LMFRFSGNSR FEVLMFDQRS  120
LCEKEASYFC KKWGQNEKES EAGMKRKARE GSEVVTESPL PQDAVRAPAE EQPQKEEETA  180
PAATRKKGRR IVTPRRASLA NVGKESSLIV IDQDKKRSPV KSPSASSTPP QKGKVTRRRS  240
VHKDSGFTHV FVSKKNAAVK SPAHVLMMQR AQAAMKSESF SVVMQPTHVY KRFYLSIPVQ  300
WADKHLGRCH QNIILRVKDK TWKTRYNYTS RNCGGISGGW RSFALDNYLQ ESDVCLFDLG  360
DSIDGTVVLD VTIFRAIESV IPAVPEASAP PAEGPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-62B3 family protein