PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM74571.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 572aa    MW: 62459.3 Da    PI: 4.7512
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM74571.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS342.19.8e-1052035713373
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 ++Ll+cA+   ++d  +a + L rl+e +s +g+p++R+a yf+e+L  r a  ++++     p++   ++ +e +  +k++++++P+ kf+hltaNqa
  OWM74571.1 203 KALLDCARL-GESDPDRAAESLVRLKESVSDHGNPVERVAYYFAEGLCGRFALGTDQTQ---DPTR---TSPEEFTLCYKALNDACPYSKFAHLTANQA 294
                 79******5.56689999999******************************99344333...3333...34678999********************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 Ilea+e+++++Hi+Df+i qG+QW+aLlqaLa+R++g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + + ++dl+ +++r++
  OWM74571.1 295 ILEATERSKKIHIVDFGIVQGVQWAALLQALATRSSGKPdKIRISGIPAPALGdsPSASLLATGNRLREFARLLELNFEFDP-ILTPIHDLTRSSFRIE 392
                 ***********************************87777**********999889999***********************.799************* PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 +gE laVn++lql++lldes        + L l ksl Pk+v++ e e+++n++ F+ r+ +a++yysa+f+sl+ ++ +es er+ vEr l+gr+iv 
  OWM74571.1 393 EGEDLAVNFMLQLYNLLDESSGPVM---AALGLAKSLGPKIVTLGEYEVSLNKAGFVSRVGNAMRYYSAVFESLDPNMLQESPERARVERLLFGRRIVG 488
                 *****************88776666...9********************************************************************** PP

        GRAS 297 vvacegae...rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee.sgslv.lgWkdrpLvsvSaW 373
                  v  e+     rrer+e + +Wr+ +eeaGF++vpls++a +qa+ ll +++ s  y++ ++ s  ++ l W++ pL++vS+W
  OWM74571.1 489 SVGPEEHTgvaRRERMEDKDQWRSLMEEAGFESVPLSQYAISQADILLWNYNySSLYSLIQStSPGFLsLAWNKVPLLTVSSW 571
                 **987654444*****************************************99999976442555555************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    
MIDLRNMGTY NANTLFKSSY LPELEKMLLE KLPNCGSSPF PDPFSAAPDS GDPGFQFPHH  60
HQHHSPLEQP SQSLGFRFGD FMGGPGGEFD SDEWMESLMG SGDSTDSSNL PPEFDFGLYG  120
AADPFVPGPS RLGNSDLARV VLSPTAALPS WAPPQSQSPP PPAPEQAVPK PAVPTSPPRN  180
RKSDAAAISS TSPEPEPSAP ILKALLDCAR LGESDPDRAA ESLVRLKESV SDHGNPVERV  240
AYYFAEGLCG RFALGTDQTQ DPTRTSPEEF TLCYKALNDA CPYSKFAHLT ANQAILEATE  300
RSKKIHIVDF GIVQGVQWAA LLQALATRSS GKPDKIRISG IPAPALGDSP SASLLATGNR  360
LREFARLLEL NFEFDPILTP IHDLTRSSFR IEEGEDLAVN FMLQLYNLLD ESSGPVMAAL  420
GLAKSLGPKI VTLGEYEVSL NKAGFVSRVG NAMRYYSAVF ESLDPNMLQE SPERARVERL  480
LFGRRIVGSV GPEEHTGVAR RERMEDKDQW RSLMEEAGFE SVPLSQYAIS QADILLWNYN  540
YSSLYSLIQS TSPGFLSLAW NKVPLLTVSS WH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-180GRAS family protein