PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM74608.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 81aa    MW: 9268.26 Da    PI: 9.5781
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM74608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.62.1e-111054345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WT+   + + +a +q+ ++   +W +Iar +g g++++++k ++ 
       OWM74608.1 10 SWTPKQNKTFERALAQYDKDtpdRWQKIARAVG-GKSAEEVKRHYE 54
                     7********************************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MASDSLTSSS WTPKQNKTFE RALAQYDKDT PDRWQKIARA VGGKSAEEVK RHYELLIEDV  60
KHIEQGRVPF PNYRSTNASS N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.28e-36MYB_related family protein