PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM74794.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 440aa MW: 49091.4 Da PI: 8.4788

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM74794.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.3	6.4e-06	96	118	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C Cg++F + +L +H r+H OWM74794.1 96 YPCRECGQVFESLKSLSNHRRVH 118 99*******************98 PP
2	zf-C2H2	11	0.0013	380	402	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+Cp C k++ + + L+ H r+H OWM74794.1 380 YRCPTCYKVYGSCHALRGHKRVH 402 9********************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MEQRYRCKQC NATFASGRVL GGHARGHDVA RRKLQKRALS AAANEPETSD PSGSRGYGPR 60 ENPKKSWKTS HSRMRSQEHG PTGAPLDHVT VLLGPYPCRE CGQVFESLKS LSNHRRVHVH 120 AHVRQEMFKF NRGRRSDLEE TLANVAPICP VRRKRSLRVF CAPPQTGESN RNEQPPVPSP 180 VSETEQDDVH ESALGLLLLS RGLRDPDDKF TEKIEILPVI QSGVSKKVDQ TTKDDALGVK 240 EISDSNYSKE VRSGDPNEEG KLVELNLQVN MVYLETECEN AEGLIVFGDG ETVMRARGDA 300 VKLGCESEEL EGCYGGLTKK PKLEHDWKGN KIKINKGSPD RRILSPTKEG QEKVQAESLL 360 TKENEPQSER DSVNMDDKTY RCPTCYKVYG SCHALRGHKR VHSVKASTGT KAGRITKVLN 420 QFWLSDIPDL LDLNAQAMCT

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MEQRYRCKQC NATFASGRVL GGHARGHDVA RRKLQKRALS AAANEPETSD PSGSRGYGPR  60
ENPKKSWKTS HSRMRSQEHG PTGAPLDHVT VLLGPYPCRE CGQVFESLKS LSNHRRVHVH  120
AHVRQEMFKF NRGRRSDLEE TLANVAPICP VRRKRSLRVF CAPPQTGESN RNEQPPVPSP  180
VSETEQDDVH ESALGLLLLS RGLRDPDDKF TEKIEILPVI QSGVSKKVDQ TTKDDALGVK  240
EISDSNYSKE VRSGDPNEEG KLVELNLQVN MVYLETECEN AEGLIVFGDG ETVMRARGDA  300
VKLGCESEEL EGCYGGLTKK PKLEHDWKGN KIKINKGSPD RRILSPTKEG QEKVQAESLL  360
TKENEPQSER DSVNMDDKTY RCPTCYKVYG SCHALRGHKR VHSVKASTGT KAGRITKVLN  420
QFWLSDIPDL LDLNAQAMCT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16610.1	1e-08	C2H2 family protein