PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM74889.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 301aa MW: 34105 Da PI: 4.7035

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM74889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.7	2.7e-13	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed +l + + G ++W+t+++ g+ R++k+c++rw +yl OWM74889.1 14 RGPWTIDEDHKLMNFILNNGIHCWRTVPKLAGLLRCGKSCRLRWINYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	55.9	9.7e-18	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T+eE++++++++ lG++ W++Ia+ ++ gRt++++k++w++ OWM74889.1 67 RGDFTEEEEDQIIQLHSSLGNR-WSKIASNFP-GRTDNEIKNHWNT 110 899*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MGRQPCCEKV GLKRGPWTID EDHKLMNFIL NNGIHCWRTV PKLAGLLRCG KSCRLRWINY 60 LRPDLKRGDF TEEEEDQIIQ LHSSLGNRWS KIASNFPGRT DNEIKNHWNT RIKKRLKQLG 120 IDPLTHMPIE KTEENNRSSI VHNNEKTAAE SLSFPLEEGS SDGKIPTLVC EVSREDISLE 180 VEHRKRVDEV ELLLDEDSND LLNNYAALCG NNSLLLGEGL FQDTKYTNPS MTSQSCSVSV 240 GDSINNSYTA SASESIQSIL EDSLSIGNSN SLQQWPVEGS VDSIFSWDDF DYLEQGDFSF 300 F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G14340.1	2e-81	MYB family protein