PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75036.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 261aa MW: 28959.6 Da PI: 6.1599

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75036.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16	2.2e-05	169	207	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++ + L++l+ + +K + a++L++A+ YIk Lq OWM75036.1 169 RKEKLGDRVAALQQLVAPY-----GKTDTASVLTEAIGYIKFLQ 207 6667778888899999888.....9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MNYCNTLDPP LNCTMNINGG VSSSPCFHDQ PSKSSSESFD VTIDTLPSSN YSTEDSFLHP 60 TSHITNVVGT LLPYPNGTEH YFPIHGCPSD KLIRQTIHKS KHSVPCIPEL LSRTPTWAVP 120 SFWLDSNFPV LDFSSEAPAS SWSSFDLSDH IRQNLSAPKS LCTYPHKVRK EKLGDRVAAL 180 QQLVAPYGKT DTASVLTEAI GYIKFLQDQV EVLREDNNGS IEWKGDLRRQ GLCLVPLSCL 240 SHIDFDSCGG PIFNWTFPRV A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	7e-28	bHLH family protein