PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75054.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 228aa    MW: 25759.3 Da    PI: 9.0933
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75054.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.61.4e-1012525698
                TTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3 56 sgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                + + +l++GW  Fvk++g++ g f++Fk+dg+++f  +v+vf+
  OWM75054.1 12 RAANYLARGWPAFVKDHGIQRGHFLLFKFDGETTF--KVMVFS 52
                33489***********************9997777..888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MATIGQRRLS RRAANYLARG WPAFVKDHGI QRGHFLLFKF DGETTFKVMV FSPTACEDKA  60
AFSSKFSRGN GKAEVQERAP STATNPHFIV HLQRSIPGRR NGRFWFAANE CMFLSVHPML  120
SVLWSSSSCG QMDEIEENHS QKQAEFLQHS DLLRRTKSRF SLVLQVVHRL EEELVKKLSG  180
TKLFCFALCC NLKATGRPDT GYQYVSAYGV MDRDDCSSSY LVASTDDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.13e-09B3 family protein