PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75055.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 228aa    MW: 25946.7 Da    PI: 8.9933
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.41.2e-136673398
                -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                s  + l+ +sg  W+vkl     sg  ++ +GW  Fvk++g++ g f+vFk+dg+++f  +vkvf+
  OWM75055.1  6 SGAVYLKGPSGYYWRVKL--IEESGNLYFIRGWPLFVKDHGIQLGYFLVFKFDGDKTF--RVKVFN 67
                44799*************..99999989999*********************998888..999987 PP
2B340.35.5e-131452241699
                 EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3  16 lvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 + +p++f++ h    +  e+kt ++ + + ++W   +  + +s r+++ +GW++Fv+  +++egD++ F+l+  ++f l+v++ r+
  OWM75055.1 145 VGVPNSFVKVHlfHFV--EQKTPIVLQWEDKEWPAAM--THGSTRTYIWGGWRDFVRVSKVQEGDICKFELV--EQFVLRVHISRH 224
                 478*****99987333..445667777789*******..*******************************86..599999999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MKGKNSGAVY LKGPSGYYWR VKLIEESGNL YFIRGWPLFV KDHGIQLGYF LVFKFDGDKT  60
FRVKVFNPTG CEDKAALGAK PSRDNASNPH NPGKELVANV EVEEDASWDR AEKAIVLARE  120
PPSVTLPHFT IQIKAYHISG GGMTVGVPNS FVKVHLFHFV EQKTPIVLQW EDKEWPAAMT  180
HGSTRTYIWG GWRDFVRVSK VQEGDICKFE LVEQFVLRVH ISRHIKEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.11e-17B3 family protein