PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75056.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 125aa    MW: 14039.2 Da    PI: 8.9153
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3543.1e-176673398
                -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3 33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                s  + l+ +sg+ W+vkl     sg+ ++++GW++Fv+++g++ g f+vFk+dg+++f  +vkvf+
  OWM75056.1  6 SGAVYLKGPSGNYWQVKL--IEESGKLYFARGWSSFVEDHGIQLGHFLVFKFDGDTTF--KVKVFN 67
                44799*************..9******************************9998888..999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MKGKNSGAVY LKGPSGNYWQ VKLIEESGKL YFARGWSSFV EDHGIQLGHF LVFKFDGDTT  60
FKVKVFNPTA CEDKAALSAK PSRDICGGWL YFVKESKVQK GDTCTFELVD QLVLCVHISK  120
HVKEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.13e-15B3 family protein