PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75057.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 260aa    MW: 29287.5 Da    PI: 9.3973
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75057.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.21.4e-139683699
                EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                  l+ +sg  W vkl     s+  +lt+GW  Fvk++++  g f++Fk+dg  e++l+vkvf++
  OWM75057.1  9 FYLKGPSGYYWPVKL--IEESSNLFLTRGWPAFVKDHDIHHGHFLLFKFDG--ETTLKVKVFSH 68
                57899**********..999999*************************877..6778****997 PP
2B348.21.9e-15167249796
                 .-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   7 psdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                   d ++ + lv+p +fa+ h  k++   t ++ + + ++W  ++  +k+ +r +l++GW +F k+ +++egD++ F+l + s    +v++
  OWM75057.1 167 VQDRGRGKTLVIPSSFAKIHFVKPK---TPIVLQWEDKEWPATV--NKSLERSYLRGGWGNFLKESKVQEGDTCKFELLEPSVL--RVHI 249
                 568888999********88865544...456666678*******..*******************************8764444..5555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MKGKSSGYFY LKGPSGYYWP VKLIEESSNL FLTRGWPAFV KDHDIHHGHF LLFKFDGETT  60
LKVKVFSHTA CEDKAAFSAK PSGGDGNNNP PNPVKALVAK VKKEEDAWDR LGDYYHSCLK  120
LSIKQNSFFA EAKVSSFICT VKAMVQAGAP STATNPHFAL QLKAYSVQDR GRGKTLVIPS  180
SFAKIHFVKP KTPIVLQWED KEWPATVNKS LERSYLRGGW GNFLKESKVQ EGDTCKFELL  240
EPSVLRVHIL KLIEEEYPDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.11e-10B3 family protein