PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75061.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 88aa    MW: 10222.4 Da    PI: 9.5614
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75061.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.58.2e-101356344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+   +l+ +a++++ ++   +W+ +ar +g g++++++k ++
       OWM75061.1 13 AWTPKQNKLFERAIALYDKDtpdRWHNVARAVG-GKSPEEVKRYY 56
                     8********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MASTSFTASH NSAWTPKQNK LFERAIALYD KDTPDRWHNV ARAVGGKSPE EVKRYYEALV  60
QDLEHIETGQ IPVPNYRRPC RQPRRDPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.17e-32MYB_related family protein