PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75067.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 109aa    MW: 11986.3 Da    PI: 6.7818
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75067.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-081258245
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     g WT+   +l+ +a +++  +   +W+  ar +g ++t++++k ++ 
       OWM75067.1 12 GTWTEKQNKLFENALALYSRDspdRWHNLARAVGGNKTPEEVKRHYD 58
                     89*****************99************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MASASGSSGN TGTWTEKQNK LFENALALYS RDSPDRWHNL ARAVGGNKTP EEVKRHYDML  60
VEDLREIEAG HIPLPPYRKV PGAGAGGAKG GYNNFMDEEQ RYICTTCAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.12e-30MYB_related family protein