PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75411.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 211aa    MW: 22945.4 Da    PI: 5.8786
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-182069255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr ++ +g+++AeIrdp+e   ++r +lg+f++ae Aa+a++aa+++l+g
  OWM75411.1 20 RYKGVRKRP-WGKFAAEIRDPVE---KTRLWLGTFDSAEAAARAYDAAARSLRG 69
                59*******.**********876...6*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MPRARPHAAA NREPLQEAIR YKGVRKRPWG KFAAEIRDPV EKTRLWLGTF DSAEAAARAY  60
DAAARSLRGV HAKTNFPLDS VLDPSFGSSE LEAAAARRTS SSLSSTAESF GAPRTFNHHA  120
GCSSSNNNLP QAAITRPPAR PPTVADDCRS DCDSSSSVVD DDVDDRCITM MTFHRPAFPF  180
DLNLPPPLDY NHDGADDPDN IDDLHATALC L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.12e-21ERF family protein