PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75533.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Dof
Protein Properties Length: 318aa    MW: 33979.6 Da    PI: 9.7288
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75533.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.51.4e-383088361
      zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                ++ l+cprC+s ntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ 
  OWM75533.1 30 QAPLNCPRCNSLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGSLRNVPVGGGSRKNKRP 88
                67899***************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MEISRSSSNT NNNNNNNQNN KKMTRPSKDQ APLNCPRCNS LNTKFCYYNN YSLSQPRYFC  60
KTCRRYWTQG GSLRNVPVGG GSRKNKRPPS SISSSAQPAI PPPPAPSLSK DYMKLFPPVG  120
FPNPSHRLGL DEAHDLNLSY PPIPSSAPTV GTNANVVSKG LSLMMMGHNF MQDLAFSSGE  180
FPSSLLDFKP ATTAAAAASS SLLNFSLAHN GNNSNDGRFG VGGGPRSFQL GLQEEISGGR  240
EARVLFPVED LKQSMPSNGR AATDHQQQQY EQNNGSSSGL LQGGGGGGGA ADSSNAGFWN  300
HGLLLSGSTP WIHGNQIQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.17e-35Dof family protein