PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75562.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 99aa    MW: 11834.5 Da    PI: 10.532
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75562.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.81.7e-103472545
                     -HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     +++E++l+++ +k+ G + W++Ia +++ gRt++q+  +w 
       OWM75562.1 34 SEQEEDLIYRMHKLVGDR-WDLIAGRIP-GRTAEQVERFWI 72
                     89**************99.*********.**********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
MERNRRRQSK SKFKSKAVDS EEVSSIEWEN IIMSEQEEDL IYRMHKLVGD RWDLIAGRIP  60
GRTAEQVERF WIMRHSEGFA FPGRRKENNK KAKNGVFIH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.16e-33MYB_related family protein