PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75620.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 283aa MW: 32318.3 Da PI: 7.0324

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75620.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.9	7.2e-16	19	66	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l d++ ++G g+W++++ g+ R +k+c++rw +yl OWM75620.1 19 KGLWSPEEDQRLRDYILRHGHGCWSSVPINAGLQRNGKSCRLRWINYL 66 678*******************************************97 PP
2	Myb_DNA-binding	47.3	4.9e-15	72	117	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T E e ++ +++ lG++ W+ Ia++++ gRt++++k++w++yl OWM75620.1 72 RGMFTVHEGETILSLHRSLGNK-WSQIAQHLP-GRTDNEIKNYWHSYL 117 7889****************.*****.**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MSCKTTDQKA TKPKTKHRKG LWSPEEDQRL RDYILRHGHG CWSSVPINAG LQRNGKSCRL 60 RWINYLRPGL KRGMFTVHEG ETILSLHRSL GNKWSQIAQH LPGRTDNEIK NYWHSYLKKR 120 VAKPEPVEPR TKSECKSADA MDSSSFQEPR HKPSSNPPRA TDLSSLPQSI LFAGWLTLDN 180 NTNENANERS FSDYYLHYAD TDLMRMICED CTDCSANLLQ DSLLQNVILG NVDNGAFGGG 240 ELIDCSYKME DQSSESGFLL DFMSTDYIYS SDMHTMNSDL MYM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52260.1	8e-62	MYB family protein