PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75631.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family HSF
Protein Properties Length: 294aa    MW: 33341.5 Da    PI: 7.867
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75631.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.21.7e-35261162101
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y++++de++++ +sw+ +g++f+v++++ fa+++LpkyFkh+nf+SFvRQLn+YgFkkv  e+         weF+h+ F++g+k+ll++i+
    OWM75631.1  26 FLTKTYQLVDDEATNDAVSWNGDGSTFIVWNTTVFARDLLPKYFKHNNFSSFVRQLNTYGFKKVIPER---------WEFSHDCFRRGEKQLLREIQ 113
                   9****************************************************************999.........******************** PP

                   XXX CS
  HSF_DNA-bind  99 rkk 101
                   r+k
    OWM75631.1 114 RRK 116
                   *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MAPPPPPEQS REATSGESQR SIPTPFLTKT YQLVDDEATN DAVSWNGDGS TFIVWNTTVF  60
ARDLLPKYFK HNNFSSFVRQ LNTYGFKKVI PERWEFSHDC FRRGEKQLLR EIQRRKMPAS  120
PPTVTVVPAP SSAIPMASWP MKSPPGSRGD EQMISVHHEP PVVCGQNCAA ELADENERLR  180
RENMILSKEL TQMKSLCSNI FSLMSSFVSG KPESNPLELL PGKRSEPEDA REREESPRLF  240
GVPIGAKRAR EDPLQRPCAS GSGEIKPEPS DCHGEQWLRQ HHQSHRTYNQ RVYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.13e-88HSF family protein