PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM75644.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 554aa MW: 60670.1 Da PI: 6.9921

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM75644.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	78.4	8.9e-25	138	191	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp++ Wt+ LH+rF++a++ G+e+A+Pk+ilelm+++gLt+++v+SHLQkYR+ OWM75644.1 138 KPKVAWTNYLHNRFLQAINFV-GIERAVPKKILELMNIPGLTRQNVASHLQKYRI 191 799****************.******************************6 PP
2	Myb_DNA-binding	28.6	3.2e-09	140	190	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 + +WT ++ ++++a++ G + +k+I + m+ g+t+ ++ s++qky+ OWM75644.1 140 KVAWTNYLHNRFLQAINFVGIEraVPKKILELMNiPGLTRQNVASHLQKYR 190 568***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 554 aa Download sequence
MDSQCQYSAE IMRSSLVKIR ILVVDDDSTS LLVVTKVLKK WNYEVMSGDN NECLMLKSLE 60 CGAAYFILKP VKPIDCKNIW QYAVASMIKL NTPTPPTSMA AASVHENLIT PQPPTSNDVK 120 SNLPSKPLKA PKDKTVKKPK VAWTNYLHNR FLQAINFVGI ERAVPKKILE LMNIPGLTRQ 180 NVASHLQKYR IFLKRVAEKG KEHQLKNSGD VLAPRPSLFT IPHPPSMITA TRGVYPYFQT 240 NQALSSSNQH GLHWGSSIPN DRSIVASSFA SLEAPNAQAR FNQQMVLGTA NNASLSRSDM 300 PSSRTDLLNN NPDLSQYSAT SDFTNLTSSK PVFQNQSTGA SQGLLTPTSL LNVNSGKPDF 360 GLGNHPGSYG NMIRFLGSAS PLNSRSSNNN YIANHQPSLG GMTTNNEVQI NIGTNQLSSG 420 FEDHGLLMDL MSNDQLEHGE NHGYEMTGNG LILNDNTPTP QLKNGDLFNI LMEHFPNLTR 480 GGEEIQQMTP FSNGSNSHGD HCVGAIIPSD AAQDQENAPW DYEDLQQLSP VVPNTGHQQQ 540 QVIPGNDASH EQAS

Sequence ? help Back to Top

Protein Sequence Length: 554 aa Download sequence

MDSQCQYSAE IMRSSLVKIR ILVVDDDSTS LLVVTKVLKK WNYEVMSGDN NECLMLKSLE  60
CGAAYFILKP VKPIDCKNIW QYAVASMIKL NTPTPPTSMA AASVHENLIT PQPPTSNDVK  120
SNLPSKPLKA PKDKTVKKPK VAWTNYLHNR FLQAINFVGI ERAVPKKILE LMNIPGLTRQ  180
NVASHLQKYR IFLKRVAEKG KEHQLKNSGD VLAPRPSLFT IPHPPSMITA TRGVYPYFQT  240
NQALSSSNQH GLHWGSSIPN DRSIVASSFA SLEAPNAQAR FNQQMVLGTA NNASLSRSDM  300
PSSRTDLLNN NPDLSQYSAT SDFTNLTSSK PVFQNQSTGA SQGLLTPTSL LNVNSGKPDF  360
GLGNHPGSYG NMIRFLGSAS PLNSRSSNNN YIANHQPSLG GMTTNNEVQI NIGTNQLSSG  420
FEDHGLLMDL MSNDQLEHGE NHGYEMTGNG LILNDNTPTP QLKNGDLFNI LMEHFPNLTR  480
GGEEIQQMTP FSNGSNSHGD HCVGAIIPSD AAQDQENAPW DYEDLQQLSP VVPNTGHQQQ  540
QVIPGNDASH EQAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01760.1	3e-23	ARR-B family protein