PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM75715.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ERF
Protein Properties Length: 261aa    MW: 29013 Da    PI: 5.3993
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM75715.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.5e-18131182155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr+++ +g+++AeIrdp     k  r++lg+f+t  +Aaka++ a+ k++g
  OWM75715.1 131 CHYRGVRRRP-WGKYAAEIRDP---ArKGSRVWLGTFDTDVDAAKAYDCAAFKMRG 182
                 79********.**********8...4445**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MDDFSALELI RQHLLADDTS FDVHSLDTTV TSFISALSFD AELCSVKIES PFSESESESE  60
SESSSSPSPT SGNDDLLYIK PEHIDRNHLH LVTLNHKYSL PRESPPPEVL KRLSRTRSDP  120
DQHDQMIIGH CHYRGVRRRP WGKYAAEIRD PARKGSRVWL GTFDTDVDAA KAYDCAAFKM  180
RGRKAILNFP SEAGDAAPPA NAGRKRRRKL KAREDIQEET AGAEPGVAVA ESTESPPAGA  240
GDSCWDDQED VRVQSVHRDN N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203210GRKRRRKL
2204208RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.16e-39ERF family protein